STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS16ADAM metallopeptidase with thrombospondin type 1 motif 16. (1165 aa)    
Predicted Functional Partners:
ENSETEP00000001957
annotation not available
    
 0.645
POFUT2
Protein O-fucosyltransferase 2.
     
 0.530
ENSETEP00000010116
annotation not available
   
  
 0.494
ENSETEP00000000612
annotation not available
     
0.483
ENSETEP00000002295
annotation not available
      
 0.482
USH1C
USH1 protein network component harmonin.
    
 
 0.472
IRX3
Iroquois homeobox 3.
      
 0.463
ADAMTS8
ADAM metallopeptidase with thrombospondin type 1 motif 8.
   
 
0.459
USH2A
Usherin.
    
 
 0.435
ARID4B
AT-rich interaction domain 4B.
    
 
 0.424
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.