STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF130Ring finger protein 130. (336 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.771
ENSETEP00000008377
annotation not available
    
 0.739
ENSETEP00000013794
annotation not available
   
 0.672
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.662
RXFP1
Relaxin family peptide receptor 1.
    
 0.625
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.625
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.625
UBL4A
Ubiquitin like 4A.
    
  0.618
ENSETEP00000001940
annotation not available
    
  0.618
ENSETEP00000008583
annotation not available
    
  0.618
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.