STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP6NLUSP6 N-terminal like. (828 aa)    
Predicted Functional Partners:
ENSETEP00000002350
annotation not available
   
 0.975
ENSETEP00000000868
annotation not available
    
 0.788
ENSETEP00000011853
annotation not available
    
 0.788
ENSETEP00000003051
annotation not available
    
 0.726
RAB5B
RAB5B, member RAS oncogene family.
    
 0.726
ENSETEP00000015943
annotation not available
    
 0.726
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
  0.664
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
  0.634
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
     
 0.621
EPS8
Epidermal growth factor receptor pathway substrate 8.
    
 
 0.617
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.