STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS1Carbamoyl-phosphate synthase 1. (1489 aa)    
Predicted Functional Partners:
OTC
Ornithine carbamoyltransferase.
 
 
 0.994
ENSETEP00000007899
annotation not available
  
 
 0.988
DHODH
Dihydroorotate dehydrogenase (quinone).
  
 0.974
PPAT
Phosphoribosyl pyrophosphate amidotransferase.
 
 
 0.972
DPYD
Dihydropyrimidine dehydrogenase.
  
 0.963
ENSETEP00000015777
annotation not available
  
 
 0.953
ENSETEP00000015952
annotation not available
  
 0.940
CYB5R4
Cytochrome b5 reductase 4.
  
 0.937
UMPS
Uridine monophosphate synthetase.
  
 
 0.932
ENSETEP00000007269
annotation not available
  
 
 0.930
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.