STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000005500annotation not available (1669 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.995
ENSETEP00000008377
annotation not available
   
 0.814
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.804
ENSETEP00000001026
annotation not available
    
 
 0.776
ENSETEP00000003106
annotation not available
    
 
 0.776
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 
 0.776
ENSETEP00000013482
annotation not available
    
 
 0.776
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.748
MARCHF6
Membrane associated ring-CH-type finger 6.
   
 
 0.733
ENSETEP00000000024
annotation not available
    
 
 0.728
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.