STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELL3Elongation factor for RNA polymerase II 3. (342 aa)    
Predicted Functional Partners:
AFF4
AF4/FMR2 family member 4.
   
 0.971
AFF1
AF4/FMR2 family member 1.
   
 0.971
EAF1
ELL associated factor 1.
    
 0.959
ENSETEP00000006314
annotation not available
    
 0.955
ENSETEP00000001402
annotation not available
    
 0.949
CCNT1
Cyclin T1.
    
 0.897
CDK9
Cyclin dependent kinase 9.
    
 0.881
MLLT3
MLLT3 super elongation complex subunit.
    
 0.878
ENSETEP00000011380
annotation not available
    
 0.878
POLR2C
RNA polymerase II subunit C.
    
 0.854
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.