STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000006600annotation not available (2654 aa)    
Predicted Functional Partners:
SCAF4
SR-related CTD associated factor 4.
   
 
 0.978
ENSETEP00000004882
annotation not available
   
 
 0.962
ENSETEP00000002073
annotation not available
   
 
 0.955
BRCA1
BRCA1 DNA repair associated.
    
 
 0.857
ENSETEP00000009399
annotation not available
   
 0.830
ENSETEP00000007711
annotation not available
    
 
 0.804
ENSETEP00000016374
annotation not available
   
 
  0.797
ENSETEP00000016376
annotation not available
   
 
  0.797
NCBP2
Nuclear cap binding protein subunit 2.
    
 
 0.793
DROSHA
Drosha ribonuclease III.
   
 
 0.783
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.