STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000007275annotation not available (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.996
ENSETEP00000004014
annotation not available
   
 
0.899
RAB8A
RAB8A, member RAS oncogene family.
    
0.830
RAB8B
RAB8B, member RAS oncogene family.
    
 0.830
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.810
SYT2
Synaptotagmin 2.
   
 0.806
SYT1
Synaptotagmin 1.
   
 0.806
ENSETEP00000000733
annotation not available
   
 
0.798
SNAP25
Synaptosome associated protein 25.
   
 0.792
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.782
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.