STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFEMP1EGF containing fibulin extracellular matrix protein 1. (493 aa)    
Predicted Functional Partners:
MFAP4
Microfibril associated protein 4.
   
 0.676
ENSETEP00000014298
annotation not available
    
 0.652
ARID4B
AT-rich interaction domain 4B.
    
 0.649
ARID4A
AT-rich interaction domain 4A.
    
 0.649
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.649
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.641
ENSETEP00000005063
annotation not available
   
 
 0.620
ENSETEP00000015907
annotation not available
    
 0.616
FREM1
FRAS1 related extracellular matrix 1.
    
 0.613
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.610
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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