STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF24Ring finger protein 24. (146 aa)    
Predicted Functional Partners:
ENSETEP00000008377
annotation not available
    
 0.864
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.855
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.741
SMAD7
SMAD family member 7.
   
 0.719
SMAD6
SMAD family member 6.
   
 0.719
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.677
ENSETEP00000013794
annotation not available
   
 0.672
ENSETEP00000001526
annotation not available
   
 0.658
ENSETEP00000008857
annotation not available
   
 0.658
UBL4A
Ubiquitin like 4A.
    
 0.632
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.