STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM2Leucine zipper and EF-hand containing transmembrane protein 2. (398 aa)    
Predicted Functional Partners:
ENSETEP00000006531
annotation not available
    
 
 0.682
RPL8
Ribosomal protein L8.
    
 
 0.681
RPS9
Ribosomal protein S9.
    
 
 0.664
ENSETEP00000007693
annotation not available
    
   0.663
RPL11
Ribosomal protein L11.
    
   0.663
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.651
ENSETEP00000003006
annotation not available
    
   0.651
RPL34
Ribosomal protein L34.
    
   0.651
RPS8
Ribosomal protein S8.
    
   0.651
ENSETEP00000006077
annotation not available
    
   0.651
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.