STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGLY1N-glycanase 1. (610 aa)    
Predicted Functional Partners:
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.998
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.995
PSMC1
Proteasome 26S subunit, ATPase 1.
    
 0.986
UBXN1
UBX domain protein 1.
    
 0.980
VCP
Valosin containing protein.
    
 0.959
DERL1
Derlin 1.
    
 0.900
SPATA5
Spermatogenesis associated 5.
    
 0.885
ENSETEP00000010769
annotation not available
    
 0.885
ENSETEP00000008377
annotation not available
    
 0.871
AMFR
Autocrine motility factor receptor.
   
 0.856
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.