STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000007972annotation not available (612 aa)    
Predicted Functional Partners:
AFDN
Afadin, adherens junction formation factor.
    
  0.821
ENSETEP00000013637
annotation not available
  
 
 
0.779
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.709
ALKBH7
alkB homolog 7.
 
   
  0.663
ACTN1
Actinin alpha 1.
     
 0.615
ENSETEP00000003007
annotation not available
     
 0.615
ENSETEP00000005233
annotation not available
     
 0.615
ENSETEP00000006174
annotation not available
     
 0.615
TRMT112
tRNA methyltransferase subunit 11-2.
   
 
 0.583
YTHDC2
YTH domain containing 2.
     
 0.484
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.