STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT11Synaptotagmin 11. (431 aa)    
Predicted Functional Partners:
SYT2
Synaptotagmin 2.
   
0.848
SYT1
Synaptotagmin 1.
   
0.848
VAMP1
Vesicle associated membrane protein 1.
   
 0.832
STON2
Stonin 2.
   
 0.802
VAMP4
Vesicle associated membrane protein 4.
    
 0.769
SNAP25
Synaptosome associated protein 25.
   
 0.760
ITSN2
Intersectin 2.
     
 0.754
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.752
RAB3C
RAB3C, member RAS oncogene family.
   
 0.750
ENSETEP00000007275
annotation not available
   
 0.750
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.