STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXR1Oxidation resistance 1. (756 aa)    
Predicted Functional Partners:
ATP6V1B2
ATPase H+ transporting V1 subunit B2.
    
 
 0.560
HCRT
Hypocretin neuropeptide precursor.
      
 0.536
WDR5
WD repeat domain 5.
   
  0.532
WDR5B
WD repeat domain 5B.
   
  0.532
TMEM150A
Transmembrane protein 150A.
      
 0.493
DMXL1
Dmx like 1.
    
 
 0.465
ATP6V1D
ATPase H+ transporting V1 subunit D.
    
 
 0.458
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
      
 0.450
ATP6V1A
ATPase H+ transporting V1 subunit A.
   
 
 0.441
WSB1
WD repeat and SOCS box containing 1.
   
  0.412
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.