STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF3ARFGEF family member 3. (2106 aa)    
Predicted Functional Partners:
ENSETEP00000003020
annotation not available
      
 0.536
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
      
 0.533
CHMP7
Charged multivesicular body protein 7.
      
 0.519
ENSETEP00000009750
annotation not available
    
 
 0.516
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.503
ORC5
Origin recognition complex subunit 5.
      
 0.489
KCNH7
Potassium voltage-gated channel subfamily H member 7.
   
  
 0.486
PSIP1
PC4 and SFRS1 interacting protein 1.
      
 0.442
DCBLD2
Discoidin, CUB and LCCL domain containing 2.
      
 0.442
STOM
Stomatin.
    
 
 0.436
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.