STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBQLN2Ubiquilin 2. (625 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.990
ITSN2
Intersectin 2.
    
  0.980
ENSETEP00000004450
annotation not available
   
 0.976
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.949
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.926
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.922
UBXN7
UBX domain protein 7.
    
 0.920
ENSETEP00000006077
annotation not available
   
 0.911
RPS8
Ribosomal protein S8.
   
 0.901
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.897
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.