STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP23ATP23 metallopeptidase and ATP synthase assembly factor homolog. (266 aa)    
Predicted Functional Partners:
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
    
 
 0.780
ENSETEP00000009750
annotation not available
    
 
 0.733
OMA1
OMA1 zinc metallopeptidase.
    
 
 0.686
ATP6
ATP synthase F0 subunit 6.
    
 
 0.685
MRPL20
Mitochondrial ribosomal protein L20.
   
    0.633
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
    
 
 0.624
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 
 0.622
DPP3
Dipeptidyl peptidase 3.
      
 0.618
MIPEP
Mitochondrial intermediate peptidase.
      
 0.618
YME1L1
YME1 like 1 ATPase.
   
 
 0.617
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.