STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB5R3Cytochrome b5 reductase 3. (292 aa)    
Predicted Functional Partners:
DPYD
Dihydropyrimidine dehydrogenase.
  
 0.976
DHODH
Dihydroorotate dehydrogenase (quinone).
  
 0.976
UMPS
Uridine monophosphate synthetase.
  
 
 0.963
CYB5A
Cytochrome b5 type A.
   
 0.941
CYB5B
Cytochrome b5 type B.
   
 0.927
CPS1
Carbamoyl-phosphate synthase 1.
  
 0.901
CAD
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 0.901
TMEM116
Transmembrane protein 116.
  
 0.901
ENSETEP00000011779
annotation not available
    
 0.892
SUOX
Sulfite oxidase.
 
 
 0.878
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.