STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALDH1L1Aldehyde dehydrogenase 1 family member L1. (902 aa)    
Predicted Functional Partners:
ENSETEP00000015777
annotation not available
  
 
 0.957
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 0.934
AMT
Aminomethyltransferase.
  
 
 0.931
ENSETEP00000007269
annotation not available
  
 
 0.929
MTHFD1
Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1.
   
 
 0.923
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.913
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.913
MTHFD2L
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
  
 0.910
ENSETEP00000009200
annotation not available
  
 0.899
MTHFD2
annotation not available
  
 0.899
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.