STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP43Growth associated protein 43. (231 aa)    
Predicted Functional Partners:
LYPLA1
Lysophospholipase 1.
     
 0.814
ENSETEP00000004972
annotation not available
   
 
 0.712
LYPLAL1
Lysophospholipase like 1.
     
 0.643
MAPT
Microtubule associated protein tau.
   
 
 0.585
WNT9A
Wnt family member 9A.
   
  
 0.562
ENSETEP00000014936
annotation not available
   
  
 0.548
NGF
Nerve growth factor.
      
 0.534
ENSETEP00000003707
annotation not available
      
 0.533
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2.
   
  
 0.533
ENSETEP00000008444
annotation not available
   
  
 0.520
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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