STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM17Tripartite motif containing 17. (409 aa)    
Predicted Functional Partners:
ENSETEP00000008377
annotation not available
    
  0.667
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.617
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
 0.600
ENSETEP00000013794
annotation not available
    
 0.598
USP13
Ubiquitin specific peptidase 13.
    
 
 0.585
ENSETEP00000004682
annotation not available
    
 
 0.577
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.564
ENSETEP00000015968
annotation not available
    
 
 0.550
KCTD2
Potassium channel tetramerization domain containing 2.
    
 0.545
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.534
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.