STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DMAMajor histocompatibility complex, class II, DM alpha. (260 aa)    
Predicted Functional Partners:
ENSETEP00000006335
annotation not available
   
0.999
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
  
0.995
ENSETEP00000004733
annotation not available
   
 0.987
ENSETEP00000007674
annotation not available
   
 0.987
ENSETEP00000015516
annotation not available
   
0.987
ENSETEP00000006389
annotation not available
   
 0.971
ENSETEP00000009393
annotation not available
   
 0.971
ENSETEP00000008923
annotation not available
   
 0.951
ENSETEP00000005615
annotation not available
   
 0.923
HLA-DOB
Major histocompatibility complex, class II, DO beta.
   
 0.923
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.