STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCR5C-X-C motif chemokine receptor 5. (355 aa)    
Predicted Functional Partners:
ENSETEP00000003960
annotation not available
    
 0.961
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.933
CCL21
C-C motif chemokine ligand 21.
    
 0.926
GNAQ
G protein subunit alpha q.
    
  0.915
CXCL10
C-X-C motif chemokine ligand 10.
    
 0.913
CCL5
C-C motif chemokine ligand 5.
    
 0.907
ENSETEP00000001815
annotation not available
    
 0.895
CCL2
C-C motif chemokine ligand 2.
    
 0.865
SAG
S-antigen visual arrestin.
    
 0.860
CCL27
C-C motif chemokine ligand 27.
     
 0.859
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.