STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A15Solute carrier family 22 member 15. (547 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
     
 0.876
PLA2G4A
Phospholipase A2 group IVA.
    
 0.806
INTS11
Integrator complex subunit 11.
   
 0.691
INTS9
Integrator complex subunit 9.
    
 0.689
INTS4
Integrator complex subunit 4.
    
 0.670
INTS3
Integrator complex subunit 3.
    
 0.663
INTS7
Integrator complex subunit 7.
    
 0.663
INTS13
Integrator complex subunit 13.
    
 0.662
INTS10
Integrator complex subunit 10.
    
 0.655
POLR2B
RNA polymerase II subunit B.
    
 0.628
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.