STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD4AFERM domain containing 4A. (1026 aa)    
Predicted Functional Partners:
ENSETEP00000011947
annotation not available
    
 
 0.711
SAV1
Salvador family WW domain containing protein 1.
    
 0.669
PLEKHA5
Pleckstrin homology domain containing A5.
    
 0.623
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.618
ENSETEP00000015717
annotation not available
    
 0.613
ENSETEP00000008912
annotation not available
    
 0.611
ENSETEP00000015432
annotation not available
    
 0.611
ENSETEP00000004371
annotation not available
      
 0.604
WWC1
WW and C2 domain containing 1.
    
 0.576
CYTH1
Cytohesin 1.
    
 
 0.565
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.