STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNC1Troponin C1, slow skeletal and cardiac type. (147 aa)    
Predicted Functional Partners:
ENSETEP00000003797
annotation not available
   
 0.998
TNNI1
Troponin I1, slow skeletal type.
   
 0.992
ENSETEP00000000036
annotation not available
   
 0.989
TNNT3
Troponin T3, fast skeletal type.
   
 0.979
SMIM20
Small integral membrane protein 20.
   
 0.938
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.871
ENSETEP00000005102
annotation not available
   
 0.859
MYL3
Myosin light chain 3.
  
 0.849
MYO3B
Myosin IIIB.
   
 0.838
MYO3A
Myosin IIIA.
   
 0.838
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.