STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSpermatogenesis associated serine rich 2 like. (542 aa)    
Predicted Functional Partners:
FAT2
FAT atypical cadherin 2.
      
 0.491
RTP4
Receptor transporter protein 4.
      
 0.483
SLITRK5
SLIT and NTRK like family member 5.
    
 
 0.472
ENSETEP00000010556
annotation not available
      
 0.470
FRMPD1
FERM and PDZ domain containing 1.
      
 0.470
ENSETEP00000004948
annotation not available
      
 0.453
TTC22
Tetratricopeptide repeat domain 22.
      
 0.450
FAM49A
Family with sequence similarity 49 member A.
      
 0.449
VPS35L
VPS35 endosomal protein sorting factor like.
      
 0.407
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.