STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA1Karyopherin subunit alpha 1. (491 aa)    
Predicted Functional Partners:
ENSETEP00000003588
annotation not available
   
 0.991
CSE1L
Chromosome segregation 1 like.
   
 0.986
NUP50
Nucleoporin 50.
   
 
 0.950
KPNA3
Karyopherin subunit alpha 3.
  
0.948
KPNA4
Karyopherin subunit alpha 4.
  
0.945
STAT1
Signal transducer and activator of transcription 1.
    
 0.928
ENSETEP00000013693
annotation not available
   
 
 0.922
NFKB1
Nuclear factor kappa B subunit 1.
    
  0.915
ENSETEP00000010506
annotation not available
    
 0.893
KPNA5
Karyopherin subunit alpha 5.
  
0.883
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.