STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSETEP00000014682annotation not available (91 aa)    
Predicted Functional Partners:
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.987
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.985
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.984
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.981
LSM1
LSM1 homolog, mRNA degradation associated.
   
 0.960
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.958
ENSETEP00000002365
annotation not available
   
 0.945
ENSETEP00000002548
annotation not available
   
 0.938
ENSETEP00000006306
annotation not available
   
 0.938
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.927
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.