STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX1PBX homeobox 1. (427 aa)    
Predicted Functional Partners:
HOXD8
Homeobox D8.
    
 0.915
HOXB5
Homeobox B5.
    
 0.908
HOXD9
Homeobox D9.
    
 
 0.897
MEIS1
Meis homeobox 1.
   
 0.874
MEIS2
Meis homeobox 2.
   
 0.874
PKNOX1
PBX/knotted 1 homeobox 1.
    
 0.853
HOXB6
Homeobox B6.
    
 0.816
HOXA2
Homeobox A2.
    
 0.795
HOXC4
Homeobox C4.
    
 0.793
PKNOX2
PBX/knotted 1 homeobox 2.
    
 0.782
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.