STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83OSWD repeat domain 83 opposite strand. (106 aa)    
Predicted Functional Partners:
CCDC47
Coiled-coil domain containing 47.
    
 
 0.906
TMEM147
Transmembrane protein 147.
   
   0.830
DAD1
Defender against cell death 1.
   
  
 0.816
TMCO1
Transmembrane and coiled-coil domains 1.
   
   0.792
ENSETEP00000001818
annotation not available
   
   0.752
ENSETEP00000007693
annotation not available
   
   0.731
RPL18
Ribosomal protein L18.
   
   0.731
ENSETEP00000001521
annotation not available
   
   0.729
SEC61B
SEC61 translocon beta subunit.
   
   0.729
RPL8
Ribosomal protein L8.
   
   0.729
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.