STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM homeobox 9. (339 aa)    
Predicted Functional Partners:
ENSETEP00000005138
annotation not available
    
 0.929
LDB2
LIM domain binding 2.
    
 0.920
LMO3
LIM domain only 3.
   
 
0.677
ENSETEP00000000359
annotation not available
    
 
 0.614
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.614
ENSETEP00000005245
annotation not available
    
 
 0.614
ENSETEP00000006472
annotation not available
    
 
 0.609
ENSETEP00000013541
annotation not available
    
 
 0.609
LHX2
LIM homeobox 2.
  
  
 
0.575
GATA2
GATA binding protein 2.
    
 0.572
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.