STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACER3Alkaline ceramidase 3. (227 aa)    
Predicted Functional Partners:
ASAH1
N-acylsphingosine amidohydrolase 1.
   
 
 0.938
CERS5
Ceramide synthase 5.
    
 0.936
ENSETEP00000010284
annotation not available
    
 0.936
CERS3
Ceramide synthase 3.
    
 0.936
CERS6
Ceramide synthase 6.
    
 0.936
ENSETEP00000010674
annotation not available
    
 0.933
SPHK1
Sphingosine kinase 1.
    
 0.933
ENSETEP00000009577
annotation not available
     
 0.918
DEGS1
Delta 4-desaturase, sphingolipid 1.
   
 
 0.918
SGPP1
Sphingosine-1-phosphate phosphatase 1.
     
 0.915
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.