STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX14Sorting nexin 14. (941 aa)    
Predicted Functional Partners:
SNX13
Sorting nexin 13.
   
 
 0.759
SNX25
Sorting nexin 25.
   
 
0.637
SNX3
Sorting nexin 3.
     
 0.574
ENSETEP00000010641
annotation not available
     
 0.520
SYNRG
Synergin gamma.
      
 0.519
YKT6
YKT6 v-SNARE homolog.
     
 0.488
STX6
Syntaxin 6.
    
 0.487
ENSETEP00000003258
annotation not available
    
 0.487
ENSETEP00000010837
annotation not available
      
 0.478
BLM
BLM RecQ like helicase.
      
 0.476
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.