STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (252 aa)    
Predicted Functional Partners:
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.983
ENSETEP00000014712
annotation not available
    
 0.931
ENSETEP00000015406
annotation not available
    
 0.931
TBPL2
TATA-box binding protein like 2.
    
 0.925
UBN2
Ubinuclein 2.
    
 0.856
ENSETEP00000004025
annotation not available
    
 0.856
ENSETEP00000008224
annotation not available
    
 0.834
ENSETEP00000012266
annotation not available
    
 0.834
HINT2
Histidine triad nucleotide binding protein 2.
    
 0.834
TBPL1
TATA-box binding protein like 1.
    
 0.824
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.