STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1La ribonucleoprotein 1, translational regulator. (879 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 
 0.736
DKC1
Dyskerin pseudouridine synthase 1.
   
 
 0.727
ATXN2
Ataxin 2.
   
 
 0.684
FXR1
FMR1 autosomal homolog 1.
    
 
 0.658
DQX1
DEAQ-box RNA dependent ATPase 1.
   
 
 0.656
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
 
 0.654
LARP1B
La ribonucleoprotein 1B.
  
 
  
0.650
PAIP1
poly(A) binding protein interacting protein 1.
   
 
 0.632
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 
 0.632
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 
 0.631
Your Current Organism:
Echinops telfairi
NCBI taxonomy Id: 9371
Other names: E. telfairi, Echinops telfairii, lesser hedgehog tenrec, small Madagascar hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.