STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC55033.1Protein of unknown function. (52 aa)    
Predicted Functional Partners:
SMC54795.1
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
       0.431
Your Current Organism:
Fulvimarina manganoxydans
NCBI taxonomy Id: 937218
Other names: CGMCC1.10972, F. manganoxydans, Fulvimarina manganoxydans Ren et al. 2014, JCM 18890, Rhizobiales bacterium CGMCC 1.10972, strain 8047
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