STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP60028.1c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains. (223 aa)    
Predicted Functional Partners:
SFP59964.1
Flagellar biosynthesis protein FlhF.
 
  
 0.937
SFP59714.1
Flagellar motor switch protein FliN/FliY.
 
  
 0.892
SFP59689.1
Flagellar motor switch protein FliM.
 
 
 0.889
SFP59622.1
Chemotaxis protein MotB.
  
 
 0.884
SFP59591.1
Chemotaxis protein MotA.
  
   0.870
SFP59995.1
Flagellar biosynthesis protein FlhG.
 
    0.845
SFP60223.1
Hypothetical protein.
 
    0.843
SFQ02923.1
FlgN protein.
 
  
 0.842
SFP60058.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.840
SFP60122.1
Chemotaxis protein CheC.
 
    0.833
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.