STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP93865.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
SFQ00376.1
Uncharacterized protein.
 
 0.997
SFP93835.1
Hypothetical protein.
 
  
 0.929
SFP93802.1
Hypothetical protein.
 
  
 0.926
SFQ36114.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
      0.899
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.809
SFQ38553.1
Nickel-dependent lactate racemase.
 
  
 0.763
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
    
  0.760
SFP69855.1
Cobalt/nickel transport system permease protein.
  
    0.622
SFQ43406.1
Cobalt/nickel transport system permease protein.
  
    0.622
SFP69823.1
Cobalt/nickel transport system permease protein.
  
    0.594
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.