STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP95911.12-oxoglutarate ferredoxin oxidoreductase, gamma subunit. (183 aa)    
Predicted Functional Partners:
SFP95937.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 0.999
SFP95959.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.993
SFP95982.1
2-oxoglutarate ferredoxin oxidoreductase, delta subunit.
 
  0.984
SFQ00064.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
 0.930
SFP75153.1
Pyruvate ferredoxin oxidoreductase beta subunit.
  
 0.915
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.903
SFP70332.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 
 0.902
SFQ30621.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.882
SFP75124.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
  
 0.879
SFQ00090.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.879
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.