STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ00556.1Carbon-monoxide dehydrogenase catalytic subunit. (606 aa)    
Predicted Functional Partners:
SFP73629.1
Fe-S-cluster-containing dehydrogenase component.
    
 0.924
SFP70332.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.915
SFQ00586.1
NitT/TauT family transport system substrate-binding protein.
 
  
 0.903
SFQ42418.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.886
SFP70294.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
    
 0.870
SFQ00625.1
NitT/TauT family transport system substrate-binding protein.
 
  
 0.855
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.826
SFQ00090.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.802
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.716
SFP74829.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 
 0.668
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.