STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (317 aa)    
Predicted Functional Partners:
SFP67471.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.955
SFQ00090.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.955
SFQ09660.1
Fumarate hydratase subunit alpha.
  
 
 0.950
SFQ09628.1
Fumarate hydratase subunit beta.
  
 
 0.940
SFP94025.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 0.936
SFQ01271.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.932
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.929
SFP92092.1
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
 0.909
SFP70294.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
     
 0.905
SFQ36544.1
Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
  
 
 0.882
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.