Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFQ10476.1 | SFQ14930.1 | SAMN05444406_11252 | SAMN05444406_11426 | CopG family transcriptional regulator / antitoxin EndoAI. | Asparaginase. | 0.427 |
SFQ14831.1 | SFQ14855.1 | SAMN05444406_11422 | SAMN05444406_11423 | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | Hypothetical protein. | 0.779 |
SFQ14831.1 | SFQ14907.1 | SAMN05444406_11422 | SAMN05444406_11425 | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | acyl-CoA thioester hydrolase. | 0.430 |
SFQ14831.1 | SFQ14930.1 | SAMN05444406_11422 | SAMN05444406_11426 | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | Asparaginase. | 0.413 |
SFQ14831.1 | pfkA | SAMN05444406_11422 | SAMN05444406_11424 | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.658 |
SFQ14855.1 | SFQ14831.1 | SAMN05444406_11423 | SAMN05444406_11422 | Hypothetical protein. | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | 0.779 |
SFQ14855.1 | SFQ14907.1 | SAMN05444406_11423 | SAMN05444406_11425 | Hypothetical protein. | acyl-CoA thioester hydrolase. | 0.629 |
SFQ14855.1 | SFQ14930.1 | SAMN05444406_11423 | SAMN05444406_11426 | Hypothetical protein. | Asparaginase. | 0.462 |
SFQ14855.1 | pfkA | SAMN05444406_11423 | SAMN05444406_11424 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.701 |
SFQ14907.1 | SFQ14831.1 | SAMN05444406_11425 | SAMN05444406_11422 | acyl-CoA thioester hydrolase. | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | 0.430 |
SFQ14907.1 | SFQ14855.1 | SAMN05444406_11425 | SAMN05444406_11423 | acyl-CoA thioester hydrolase. | Hypothetical protein. | 0.629 |
SFQ14907.1 | SFQ14930.1 | SAMN05444406_11425 | SAMN05444406_11426 | acyl-CoA thioester hydrolase. | Asparaginase. | 0.773 |
SFQ14907.1 | SFQ14951.1 | SAMN05444406_11425 | SAMN05444406_11427 | acyl-CoA thioester hydrolase. | Sugar phosphate isomerase/epimerase. | 0.477 |
SFQ14907.1 | pfkA | SAMN05444406_11425 | SAMN05444406_11424 | acyl-CoA thioester hydrolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.742 |
SFQ14930.1 | SFQ10476.1 | SAMN05444406_11426 | SAMN05444406_11252 | Asparaginase. | CopG family transcriptional regulator / antitoxin EndoAI. | 0.427 |
SFQ14930.1 | SFQ14831.1 | SAMN05444406_11426 | SAMN05444406_11422 | Asparaginase. | Transcription attenuation protein (tryptophan RNA-binding attenuator protein). | 0.413 |
SFQ14930.1 | SFQ14855.1 | SAMN05444406_11426 | SAMN05444406_11423 | Asparaginase. | Hypothetical protein. | 0.462 |
SFQ14930.1 | SFQ14907.1 | SAMN05444406_11426 | SAMN05444406_11425 | Asparaginase. | acyl-CoA thioester hydrolase. | 0.773 |
SFQ14930.1 | SFQ14951.1 | SAMN05444406_11426 | SAMN05444406_11427 | Asparaginase. | Sugar phosphate isomerase/epimerase. | 0.477 |
SFQ14930.1 | pfkA | SAMN05444406_11426 | SAMN05444406_11424 | Asparaginase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.623 |
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