STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ16550.1D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family. (361 aa)    
Predicted Functional Partners:
SFQ30621.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.895
SFP67471.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.850
SFQ16493.1
Succinate dehydrogenase / fumarate reductase flavoprotein subunit.
 
    0.787
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.776
SFQ00090.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.719
SFQ16521.1
Transcriptional regulator, LacI family.
   
   0.715
SFQ04869.1
2-amino-3-ketobutyrate coenzyme A ligase.
 
 
  0.640
SFQ38616.1
Serine palmitoyltransferase.
 
 
  0.640
SFQ16462.1
2,4-dienoyl-CoA reductase.
 
    0.628
SFQ38602.1
Threonine dehydrogenase.
 
  
 
0.566
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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