STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ19486.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (313 aa)    
Predicted Functional Partners:
SFQ19461.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.985
SFQ19509.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.977
SFQ38130.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.974
SFP68378.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.949
SFP96078.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.913
SFP68329.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.911
SFP75940.1
Oligogalacturonide transport system permease protein.
 
  0.911
SFQ48914.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.909
SFP80069.1
Multiple sugar transport system permease protein.
  
  0.900
SFQ16223.1
Multiple sugar transport system permease protein.
 
  0.895
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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