STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ24968.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
SFQ37228.1
Beta-L-arabinofuranosidase, GH127.
  
     0.528
SFQ43479.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.502
SFP76052.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.478
SFQ27952.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
  
     0.477
SFQ16409.1
Endo-1,4-beta-xylanase.
  
     0.473
SFP94538.1
Endo-1,4-beta-xylanase.
  
     0.419
SFQ43463.1
Lysophospholipase L1.
  
     0.405
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.