STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ28217.1Putative aldouronate transport system permease protein. (316 aa)    
Predicted Functional Partners:
SFQ28199.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.944
SFQ28285.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
 
  0.919
SFP82250.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.881
SFQ47751.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.881
SFP74733.1
Putative aldouronate transport system permease protein.
  
  0.876
SFP82279.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.876
SFP95329.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.876
SFQ30402.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.876
SFQ47780.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.876
SFQ31310.1
Putative aldouronate transport system permease protein.
  
  0.875
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.