STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ29049.1Sporulation protein YabP. (100 aa)    
Predicted Functional Partners:
SFQ29027.1
Spore cortex biosynthesis protein YabQ.
 
  
 0.966
SFP91046.1
Stage III sporulation protein AC.
  
  
 0.865
SFQ29216.1
AbrB family transcriptional regulator, stage V sporulation protein T.
 
     0.845
SFQ36741.1
Similar to stage IV sporulation protein.
 
   
 0.802
SFP91624.1
Stage IV sporulation protein B.
  
   
 0.799
SFP81202.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.775
SFP62149.1
Spore germination protein.
  
     0.774
SFP63678.1
Spore germination protein KA.
  
     0.774
SFQ22698.1
Spore germination protein KA.
  
     0.774
SFQ40487.1
Stage II sporulation protein E.
 
     0.772
Your Current Organism:
Caldicoprobacter faecalis
NCBI taxonomy Id: 937334
Other names: Acetomicrobium faecale, Acetomicrobium faecalis, C. faecalis, DSM 20678, JCM 30420
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