Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COLO4_02910 | COLO4_09030 | A0A1R3L027 | A0A1R3KDH0 | LRRNT_2 domain-containing protein. | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | 0.584 |
COLO4_02910 | COLO4_11304 | A0A1R3L027 | A0A1R3K521 | LRRNT_2 domain-containing protein. | No apical meristem (NAM) protein. | 0.448 |
COLO4_02910 | COLO4_17291 | A0A1R3L027 | A0A1R3JDA4 | LRRNT_2 domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.425 |
COLO4_02910 | COLO4_17885 | A0A1R3L027 | A0A1R3JB97 | LRRNT_2 domain-containing protein. | Plastocyanin-like protein. | 0.525 |
COLO4_02910 | COLO4_25887 | A0A1R3L027 | A0A1R3HZJ3 | LRRNT_2 domain-containing protein. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.515 |
COLO4_02910 | COLO4_28561 | A0A1R3L027 | A0A1R3HK78 | LRRNT_2 domain-containing protein. | Cytochrome P450. | 0.426 |
COLO4_02910 | COLO4_29235 | A0A1R3L027 | A0A1R3HFJ6 | LRRNT_2 domain-containing protein. | Ubiquitin. | 0.421 |
COLO4_02910 | COLO4_36495 | A0A1R3L027 | A0A1R3G8S7 | LRRNT_2 domain-containing protein. | BURP domain-containing protein. | 0.537 |
COLO4_02910 | COLO4_37585 | A0A1R3L027 | A0A1R3G0L8 | LRRNT_2 domain-containing protein. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.463 |
COLO4_07128 | COLO4_37585 | A0A1R3KL23 | A0A1R3G0L8 | Uncharacterized protein. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.445 |
COLO4_09030 | COLO4_02910 | A0A1R3KDH0 | A0A1R3L027 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | LRRNT_2 domain-containing protein. | 0.584 |
COLO4_09030 | COLO4_11304 | A0A1R3KDH0 | A0A1R3K521 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | No apical meristem (NAM) protein. | 0.414 |
COLO4_09030 | COLO4_17291 | A0A1R3KDH0 | A0A1R3JDA4 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.527 |
COLO4_09030 | COLO4_17885 | A0A1R3KDH0 | A0A1R3JB97 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | Plastocyanin-like protein. | 0.521 |
COLO4_09030 | COLO4_25887 | A0A1R3KDH0 | A0A1R3HZJ3 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.563 |
COLO4_09030 | COLO4_29235 | A0A1R3KDH0 | A0A1R3HFJ6 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | Ubiquitin. | 0.418 |
COLO4_09030 | COLO4_36495 | A0A1R3KDH0 | A0A1R3G8S7 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | BURP domain-containing protein. | 0.484 |
COLO4_09030 | COLO4_37585 | A0A1R3KDH0 | A0A1R3G0L8 | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | UDP-glucuronosyl/UDP-glucosyltransferase. | 0.543 |
COLO4_11304 | COLO4_02910 | A0A1R3K521 | A0A1R3L027 | No apical meristem (NAM) protein. | LRRNT_2 domain-containing protein. | 0.448 |
COLO4_11304 | COLO4_09030 | A0A1R3K521 | A0A1R3KDH0 | No apical meristem (NAM) protein. | Heme peroxidase, plant/fungal/bacterial; Belongs to the peroxidase family. | 0.414 |
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